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M. domestica Gene: PTPRN2 - ENSMODG00000005262 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000005262
NamePTPRN2
Descriptionprotein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:HGNC Symbol;Acc:HGNC:9677]
OrganismMonodelphis domestica (opossum)
Synonym(s)ia-2beta, icaar, kiaa0387, phogrin
Orthologs(s)2 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.51e3
  • 1.51e3
  • 3.16e3
  • 5.95e3
93.01
  • 93.01
  • 85.42
  • 72.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.69e3
  • 1.69e3
  • 5.05e3
92.21
  • 92.21
  • 76.69
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
2.09e3
  • 2.09e3
90.38
  • 90.38
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
2.25e3
  • 2.25e3
  • 2.48e3
  • 5.04e3
89.63
  • 89.63
  • 88.57
  • 76.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.09e3
  • 3.09e3
  • 4.73e3
85.75
  • 85.75
  • 78.17
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
3.37e3
  • 3.37e3
84.47
  • 84.47
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.97e3
  • 3.97e3
81.68
  • 81.68
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.83e3
  • 4.83e3
  • 9.78e3
77.72
  • 77.72
  • 54.85
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
4.97e3
  • 4.97e3
  • 9.94e3
77.08
  • 77.08
  • 54.11
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.58e3
  • 6.58e3
  • 8.38e3
  • 8.91e3
69.64
  • 69.64
  • 61.33
  • 58.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.20e3
  • 7.20e3
66.77
  • 66.77
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
9.09e3
  • 9.09e3
58.02
  • 58.02
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
50.25
  • 50.25
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.17e4
  • 1.17e4
46.11
  • 46.11
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
44.14
  • 44.14
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.40e4
42.67
  • 42.67
  • 35.54
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
42.28
  • 42.28
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.33e4
  • 1.33e4
  • 1.35e4
38.68
  • 38.68
  • 37.66
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.34e4
  • 1.34e4
37.99
  • 37.99
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.36e4
  • 1.36e4
36.99
  • 36.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria2 species2 genesCompare expression

Orthology information comes from OMA : ENSMODG00000005262.

Cross-references

EnsemblENSMODG00000005262 (PTPRN2)
HGNCHGNC:9677 (PTPRN2)
Uniprot/SPTREMBLF7GGR2, F7GGR2_MONDO

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