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M. domestica Gene: CIRBP - ENSMODG00000005290 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000005290
NameCIRBP
Descriptioncold inducible RNA binding protein [Source:HGNC Symbol;Acc:HGNC:1982]
OrganismMonodelphis domestica (opossum)
Synonym(s)cirp
Orthologs(s)14 orthologs
Paralog(s)280 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
159
  • 159
  • 341
  • 441
99.27
  • 99.27
  • 98.43
  • 97.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
170
  • 170
  • 342
99.22
  • 99.22
  • 98.43
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
191
  • 191
99.12
  • 99.12
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
199
  • 199
99.09
  • 99.09
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
206
  • 206
  • 222
99.05
  • 99.05
  • 98.98
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
223
  • 223
  • 275
  • 369
98.98
  • 98.98
  • 98.73
  • 98.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
395
  • 395
98.18
  • 98.18
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
446
  • 446
97.95
  • 97.95
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
558
  • 558
97.43
  • 97.43
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
565
  • 565
97.39
  • 97.39
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
566
  • 566
  • 618
  • 1.13e3
97.39
  • 97.39
  • 97.15
  • 94.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
569
  • 569
97.38
  • 97.38
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
664
  • 664
  • 1.33e3
96.94
  • 96.94
  • 93.89
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
750
  • 750
  • 837
96.54
  • 96.54
  • 96.14
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
889
  • 889
95.90
  • 95.90
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
907
  • 907
95.82
  • 95.82
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
919
  • 919
95.76
  • 95.76
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
945
  • 945
  • 979
  • 1.79e3
95.64
  • 95.64
  • 95.49
  • 91.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.17e3
  • 1.17e3
  • 1.28e3
  • 1.39e3
94.60
  • 94.60
  • 94.08
  • 93.61
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.22e3
  • 2.22e3
89.74
  • 89.74
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
2.67e3
  • 2.67e3
87.68
  • 87.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria10 species10 genesCompare expression
Mammalia11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression

Orthology information comes from OMA : ENSMODG00000005290.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota280 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000005290.

Cross-references

EnsemblENSMODG00000005290 (CIRBP)
HGNCHGNC:1982 (CIRBP)
Uniprot/SPTREMBLF7E6M5, F7E6M5_MONDO

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