M. domestica Gene: PFN1 - ENSMODG00000005299 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000005299
NamePFN1
Descriptionprofilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
OrganismMonodelphis domestica (opossum)
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
61.0
  • 61.0
99.72
  • 99.72
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
65.3
  • 65.3
99.70
  • 99.70
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
66.0
  • 66.0
99.70
  • 99.70
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
70.3
  • 70.3
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
103
  • 103
99.53
  • 99.53
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
107
  • 107
  • 179
  • 418
99.51
  • 99.51
  • 99.18
  • 98.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
117
  • 117
99.47
  • 99.47
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
119
  • 119
  • 149
  • 216
99.46
  • 99.46
  • 99.32
  • 99.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
121
  • 121
  • 345
99.45
  • 99.45
  • 98.41
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
126
  • 126
99.43
  • 99.43
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
138
  • 138
  • 176
99.37
  • 99.37
  • 99.19
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
140
  • 140
  • 144
99.36
  • 99.36
  • 99.34
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
140
  • 140
  • 283
99.36
  • 99.36
  • 98.70
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
145
  • 145
99.34
  • 99.34
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
179
  • 179
  • 238
  • 245
99.18
  • 99.18
  • 98.91
  • 98.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
214
  • 214
  • 251
  • 301
99.02
  • 99.02
  • 98.85
  • 98.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
327
  • 327
98.49
  • 98.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
416
  • 416
  • 482
  • 1.23e3
98.09
  • 98.09
  • 97.78
  • 94.34
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
609
  • 609
97.19
  • 97.19
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.03e3
  • 1.03e3
95.27
  • 95.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000005299.

Cross-references

EnsemblENSMODG00000005299 (PFN1)
HGNCHGNC:8881 (PFN1)
Uniprot/SPTREMBLF7DMM7, F7DMM7_MONDO

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