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M. domestica Gene: SPATA19 - ENSMODG00000005344 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000005344
NameSPATA19
Descriptionspermatogenesis associated 19 [Source:HGNC Symbol;Acc:HGNC:30614]
OrganismMonodelphis domestica (opossum)
Synonym(s)ct132, flj25851, spas1, spergen1
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
329
  • 329
  • 408
  • 455
98.49
  • 98.49
  • 98.12
  • 97.90
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
353
  • 353
98.37
  • 98.37
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
441
  • 441
97.97
  • 97.97
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
51.07
  • 51.07
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
42.35
  • 42.35
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
34.38
  • 34.38
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
33.44
  • 33.44
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.48e4
  • 1.48e4
31.60
  • 31.60
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
31.22
  • 31.22
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
  • 1.81e4
24.33
  • 24.33
  • 16.65
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
18.14
  • 18.14
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression

Orthology information comes from OMA : ENSMODG00000005344.

Cross-references

EnsemblENSMODG00000005344 (SPATA19)
HGNCHGNC:30614 (SPATA19)
Uniprot/SPTREMBLF7CHP2, F7CHP2_MONDO

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