M. domestica Gene: MLC1 - ENSMODG00000005396 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000005396
NameMLC1
Descriptionmegalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
OrganismMonodelphis domestica (opossum)
Synonym(s)kiaa0027, lvm, mlc, vl
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.22e3
  • 1.22e3
94.36
  • 94.36
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
2.24e3
  • 2.24e3
  • 2.56e3
89.68
  • 89.68
  • 88.17
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.27e3
  • 2.27e3
  • 2.85e3
  • 1.40e4
89.53
  • 89.53
  • 86.85
  • 35.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.80e3
  • 5.80e3
  • 6.26e3
  • 6.58e3
73.25
  • 73.25
  • 71.10
  • 69.64
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
7.17e3
  • 7.17e3
66.89
  • 66.89
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.60e3
  • 9.60e3
55.68
  • 55.68
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
  • 1.45e4
  • 1.53e4
39.20
  • 39.20
  • 32.86
  • 29.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
31.98
  • 31.98
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
29.65
  • 29.65
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
  • 1.66e4
26.12
  • 26.12
  • 23.19
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.67e4
  • 1.67e4
  • 1.84e4
23.06
  • 23.06
  • 15.26
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.74e4
  • 1.74e4
19.60
  • 19.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000005396.

Cross-references

EnsemblENSMODG00000005396 (MLC1)
HGNCHGNC:17082 (MLC1)
Uniprot/SPTREMBLF7GG66, F7GG66_MONDO

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