M. domestica Gene: MED16 - ENSMODG00000005719 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000005719
NameMED16
Descriptionmediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
OrganismMonodelphis domestica (opossum)
Synonym(s)drip92, thrap5, trap95
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.00e3
  • 6.00e3
  • 7.03e3
  • 7.88e3
72.29
  • 72.29
  • 67.54
  • 63.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.32e3
  • 6.32e3
70.85
  • 70.85
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.35e3
  • 6.35e3
70.70
  • 70.70
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
6.47e3
  • 6.47e3
70.11
  • 70.11
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.48e3
  • 6.48e3
  • 6.78e3
70.07
  • 70.07
  • 68.70
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.55e3
  • 6.55e3
  • 7.88e3
  • 8.18e3
69.77
  • 69.77
  • 63.63
  • 62.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.67e3
  • 6.67e3
69.22
  • 69.22
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
6.93e3
  • 6.93e3
  • 7.36e3
68.00
  • 68.00
  • 66.03
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
7.02e3
  • 7.02e3
  • 7.45e3
67.59
  • 67.59
  • 65.62
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.41e3
  • 7.41e3
  • 7.60e3
  • 8.59e3
65.81
  • 65.81
  • 64.91
  • 60.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.67e3
  • 7.67e3
64.60
  • 64.60
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
7.98e3
  • 7.98e3
63.15
  • 63.15
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
8.03e3
  • 8.03e3
62.94
  • 62.94
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.14e3
  • 8.14e3
  • 8.64e3
  • 8.90e3
62.45
  • 62.45
  • 60.12
  • 58.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.24e3
  • 8.24e3
  • 8.40e3
61.96
  • 61.96
  • 61.22
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.27e3
  • 8.27e3
61.83
  • 61.83
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
8.34e3
  • 8.34e3
61.51
  • 61.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
  • 1.20e4
  • 1.20e4
49.63
  • 49.63
  • 44.66
  • 44.42
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
48.89
  • 48.89
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
44.59
  • 44.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression
Bilateria20 species20 genesCompare expression

Orthology information comes from OMA : ENSMODG00000005719.

Cross-references

EnsemblENSMODG00000005719 (MED16)
HGNCHGNC:17556 (MED16)
Uniprot/SPTREMBLF6U312, F6U312_MONDO

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