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M. domestica Gene: CTCF - ENSMODG00000005757 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000005757
NameCTCF
DescriptionCCCTC-binding factor (zinc finger protein) [Source:HGNC Symbol;Acc:HGNC:13723]
OrganismMonodelphis domestica (opossum)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.33e3
  • 1.33e3
93.88
  • 93.88
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.45e3
  • 1.45e3
93.32
  • 93.32
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.01e3
  • 2.01e3
  • 2.34e3
  • 3.44e3
90.72
  • 90.72
  • 89.19
  • 84.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
2.19e3
  • 2.19e3
89.88
  • 89.88
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
2.25e3
  • 2.25e3
  • 4.68e3
89.61
  • 89.61
  • 78.39
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
2.42e3
  • 2.42e3
88.84
  • 88.84
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.82e3
  • 2.82e3
  • 2.83e3
87.01
  • 87.01
  • 86.93
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.01e3
  • 3.01e3
  • 4.12e3
86.13
  • 86.13
  • 80.97
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.22e3
  • 3.22e3
  • 3.80e3
85.14
  • 85.14
  • 82.44
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.33e3
  • 3.33e3
  • 3.38e3
  • 3.54e3
84.63
  • 84.63
  • 84.41
  • 83.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
3.58e3
  • 3.58e3
83.49
  • 83.49
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.68e3
  • 3.68e3
  • 4.01e3
  • 4.29e3
83.01
  • 83.01
  • 81.48
  • 80.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.70e3
  • 3.70e3
82.90
  • 82.90
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.76e3
  • 3.76e3
82.64
  • 82.64
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.16e3
  • 4.16e3
  • 4.36e3
  • 5.34e3
80.78
  • 80.78
  • 79.89
  • 75.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
4.30e3
  • 4.30e3
80.15
  • 80.15
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.21e3
  • 5.21e3
75.97
  • 75.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.84e3
  • 5.84e3
  • 7.38e3
  • 8.14e3
73.06
  • 73.06
  • 65.93
  • 62.44
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
6.49e3
  • 6.49e3
70.05
  • 70.05
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.96e3
  • 6.96e3
67.89
  • 67.89
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
8.30e3
  • 8.30e3
61.67
  • 61.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000005757 (CTCF)
HGNCHGNC:13723 (CTCF)
Uniprot/SPTREMBLF6QDS6, F6QDS6_MONDO

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