M. domestica Gene: PER3 - ENSMODG00000005802 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000005802
NamePER3
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847]
OrganismMonodelphis domestica (opossum)
Orthologs(s)14 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.77e3
  • 4.77e3
  • 6.39e3
  • 8.34e3
77.96
  • 77.96
  • 70.51
  • 61.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.83e3
  • 4.83e3
  • 7.00e3
77.69
  • 77.69
  • 67.69
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
5.14e3
  • 5.14e3
  • 5.67e3
  • 1.26e4
76.27
  • 76.27
  • 73.81
  • 41.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
5.28e3
  • 5.28e3
75.64
  • 75.64
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.40e3
  • 5.40e3
75.05
  • 75.05
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.55e3
  • 5.55e3
  • 9.41e3
74.38
  • 74.38
  • 56.54
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
6.18e3
  • 6.18e3
71.46
  • 71.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.21e3
  • 6.21e3
  • 6.86e3
  • 8.19e3
71.33
  • 71.33
  • 68.31
  • 62.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.34e3
  • 6.34e3
70.74
  • 70.74
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
6.68e3
  • 6.68e3
69.16
  • 69.16
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.78e3
  • 6.78e3
  • 7.70e3
  • 7.88e3
68.71
  • 68.71
  • 64.45
  • 63.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.98e3
  • 6.98e3
  • 7.61e3
67.79
  • 67.79
  • 64.86
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.03e3
  • 7.03e3
  • 9.53e3
  • 1.04e4
67.57
  • 67.57
  • 56.00
  • 51.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
8.39e3
  • 8.39e3
61.26
  • 61.26
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.75e3
  • 9.75e3
55.01
  • 55.01
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
1.01e4
  • 1.01e4
  • 1.06e4
53.39
  • 53.39
  • 51.24
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
52.42
  • 52.42
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
50.51
  • 50.51
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
49.28
  • 49.28
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
41.11
  • 41.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSMODG00000005802.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000005802.

Cross-references

EnsemblENSMODG00000005802 (PER3)
HGNCHGNC:8847 (PER3)
Uniprot/SPTREMBLF6TZQ7, F6TZQ7_MONDO

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