M. domestica Gene: MSX2 - ENSMODG00000005933 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000005933
NameMSX2
Descriptionmsh homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7392]
OrganismMonodelphis domestica (opossum)
Synonym(s)crs2, fpp, hox8, msh, pfm, pfm1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
807
  • 807
  • 2.16e3
96.28
  • 96.28
  • 90.05
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.48e3
  • 1.48e3
93.19
  • 93.19
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.18e3
  • 2.18e3
  • 2.31e3
89.95
  • 89.95
  • 89.35
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.19e3
  • 2.19e3
89.88
  • 89.88
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
2.42e3
  • 2.42e3
88.85
  • 88.85
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.46e3
  • 2.46e3
88.66
  • 88.66
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.53e3
  • 3.53e3
  • 1.24e4
  • 1.76e4
83.70
  • 83.70
  • 42.88
  • 18.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.43e3
  • 5.43e3
  • 1.50e4
  • 1.62e4
74.93
  • 74.93
  • 30.61
  • 25.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
51.34
  • 51.34
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.29e4
  • 1.29e4
  • 1.31e4
40.61
  • 40.61
  • 39.40
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
36.23
  • 36.23
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
  • 1.41e4
  • 1.44e4
35.74
  • 35.74
  • 34.86
  • 33.52
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
31.99
  • 31.99
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
29.07
  • 29.07
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
25.72
  • 25.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000005933 (MSX2)
HGNCHGNC:7392 (MSX2)
Uniprot/SPTREMBLF6WWM9, F6WWM9_MONDO

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