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M. domestica Gene: TRUB2 - ENSMODG00000005940 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000005940
NameTRUB2
DescriptionTruB pseudouridine (psi) synthase family member 2 [Source:HGNC Symbol;Acc:HGNC:17170]
OrganismMonodelphis domestica (opossum)
Synonym(s)clone24922

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.90e3
  • 5.90e3
  • 6.61e3
72.76
  • 72.76
  • 69.47
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.03e3
  • 6.03e3
  • 6.10e3
  • 7.15e3
72.16
  • 72.16
  • 71.85
  • 67.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.29e3
  • 6.29e3
70.96
  • 70.96
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.75e3
  • 6.75e3
68.85
  • 68.85
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.76e3
  • 6.76e3
  • 9.18e3
  • 1.17e4
68.78
  • 68.78
  • 57.61
  • 45.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.36e3
  • 7.36e3
  • 7.60e3
66.00
  • 66.00
  • 64.91
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
7.76e3
  • 7.76e3
64.18
  • 64.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.84e3
  • 7.84e3
  • 8.99e3
  • 9.74e3
63.83
  • 63.83
  • 58.51
  • 55.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
7.93e3
  • 7.93e3
63.42
  • 63.42
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
7.96e3
  • 7.96e3
  • 9.12e3
63.25
  • 63.25
  • 57.89
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
8.49e3
  • 8.49e3
60.83
  • 60.83
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.83e3
  • 8.83e3
59.26
  • 59.26
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.74e3
  • 9.74e3
  • 1.09e4
  • 1.15e4
55.02
  • 55.02
  • 49.61
  • 46.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
  • 1.11e4
  • 1.22e4
53.78
  • 53.78
  • 48.61
  • 43.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
53.15
  • 53.15
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
51.43
  • 51.43
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
51.14
  • 51.14
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.08e4
  • 1.08e4
  • 1.17e4
50.04
  • 50.04
  • 45.76
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
46.04
  • 46.04
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.18e4
  • 1.18e4
45.31
  • 45.31
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
34.56
  • 34.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000005940 (TRUB2)
HGNCHGNC:17170 (TRUB2)
Uniprot/SPTREMBLF6WW62, F6WW62_MONDO

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