M. domestica Gene: NKX2-5 - ENSMODG00000006154 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000006154
NameNKX2-5
DescriptionNK2 homeobox 5 [Source:HGNC Symbol;Acc:HGNC:2488]
OrganismMonodelphis domestica (opossum)
Synonym(s)csx, csx1, nkx2.5, nkx2e, nkx4-1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
858
  • 858
  • 897
  • 1.15e3
96.04
  • 96.04
  • 95.86
  • 94.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
7.48e3
  • 7.48e3
65.47
  • 65.47
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.12e4
  • 1.12e4
48.24
  • 48.24
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.91e4
47.26
  • 47.26
  • 11.71
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
41.33
  • 41.33
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
34.88
  • 34.88
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
28.07
  • 28.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000006154 (NKX2-5)
HGNCHGNC:2488 (NKX2-5)
Uniprot/SPTREMBLF7BSL0, F7BSL0_MONDO

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