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M. domestica Gene: NKX2-2 - ENSMODG00000006177 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000006177
NameNKX2-2
DescriptionNK2 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7835]
OrganismMonodelphis domestica (opossum)
Synonym(s)nkx2.2, nkx2b

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
3.80e3
  • 3.80e3
  • 8.99e3
82.48
  • 82.48
  • 58.52
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
7.43e3
  • 7.43e3
65.71
  • 65.71
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
7.55e3
  • 7.55e3
  • 9.56e3
  • 1.13e4
65.17
  • 65.17
  • 55.87
  • 48.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.39e4
  • 1.39e4
35.70
  • 35.70
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
  • 2.08e4
22.44
  • 22.44
  • 4.20
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.70e4
  • 1.70e4
21.70
  • 21.70
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.94e4
  • 1.94e4
10.57
  • 10.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000006177 (NKX2-2)
HGNCHGNC:7835 (NKX2-2)
Uniprot/SPTREMBLF7B516, F7B516_MONDO

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