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M. domestica Gene: FCF1 - ENSMODG00000006179 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000006179
NameFCF1
DescriptionFCF1 rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
OrganismMonodelphis domestica (opossum)
Synonym(s)bka, c14orf111, cgi-35, utp24

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
1.60e3
  • 1.60e3
  • 2.55e3
92.63
  • 92.63
  • 88.25
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.76e3
  • 1.76e3
  • 2.46e3
  • 4.60e3
91.90
  • 91.90
  • 88.63
  • 78.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.81e3
  • 1.81e3
91.65
  • 91.65
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.85e3
  • 1.85e3
91.44
  • 91.44
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.88e3
  • 1.88e3
91.35
  • 91.35
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.93e3
  • 1.93e3
  • 1.94e3
91.10
  • 91.10
  • 91.05
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.18e3
  • 2.18e3
  • 2.47e3
89.93
  • 89.93
  • 88.59
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
2.40e3
  • 2.40e3
88.90
  • 88.90
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.52e3
  • 2.52e3
88.36
  • 88.36
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.53e3
  • 2.53e3
  • 4.69e3
  • 6.45e3
88.31
  • 88.31
  • 78.36
  • 70.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.57e3
  • 2.57e3
  • 2.76e3
  • 3.64e3
88.12
  • 88.12
  • 87.24
  • 83.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
2.63e3
  • 2.63e3
87.86
  • 87.86
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.67e3
  • 2.67e3
87.66
  • 87.66
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.72e3
  • 2.72e3
87.46
  • 87.46
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.80e3
  • 2.80e3
87.09
  • 87.09
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.88e3
  • 2.88e3
  • 3.63e3
  • 4.06e3
86.73
  • 86.73
  • 83.24
  • 81.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.91e3
  • 2.91e3
86.56
  • 86.56
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
3.04e3
  • 3.04e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.22e3
  • 3.22e3
  • 4.34e3
  • 6.53e3
85.14
  • 85.14
  • 79.95
  • 69.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.92e3
  • 3.92e3
  • 5.28e3
81.91
  • 81.91
  • 75.61
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.33e3
  • 4.33e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
8.03e3
  • 8.03e3
62.93
  • 62.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000006179 (FCF1)
HGNCHGNC:20220 (FCF1)
Uniprot/SPTREMBLF7B4X9, F7B4X9_MONDO

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