M. domestica Gene: TIMP4 - ENSMODG00000006199 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000006199
NameTIMP4
DescriptionTIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
OrganismMonodelphis domestica (opossum)
Orthologs(s)15 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
295
  • 295
98.64
  • 98.64
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
419
  • 419
  • 1.21e3
98.07
  • 98.07
  • 94.40
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
603
  • 603
97.22
  • 97.22
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
641
  • 641
97.04
  • 97.04
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
716
  • 716
  • 1.68e3
  • 7.13e3
96.70
  • 96.70
  • 92.25
  • 67.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.29e3
  • 1.29e3
  • 1.99e3
  • 2.36e3
94.06
  • 94.06
  • 90.81
  • 89.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.34e3
  • 1.34e3
93.83
  • 93.83
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.49e3
  • 2.49e3
  • 6.00e3
  • 6.74e3
88.51
  • 88.51
  • 72.31
  • 68.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.78e3
  • 2.78e3
87.16
  • 87.16
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.25e3
  • 3.25e3
  • 3.30e3
84.99
  • 84.99
  • 84.76
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.72e3
  • 3.72e3
  • 4.18e3
  • 5.19e3
82.84
  • 82.84
  • 80.70
  • 76.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.68e3
  • 4.68e3
  • 5.46e3
78.39
  • 78.39
  • 74.81
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
5.68e3
  • 5.68e3
73.80
  • 73.80
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
5.99e3
  • 5.99e3
72.35
  • 72.35
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.80e3
  • 6.80e3
68.60
  • 68.60
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
8.53e3
  • 8.53e3
60.63
  • 60.63
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
8.78e3
  • 8.78e3
  • 9.60e3
59.48
  • 59.48
  • 55.66
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
9.09e3
  • 9.09e3
  • 9.69e3
  • 1.12e4
58.01
  • 58.01
  • 55.26
  • 48.12
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
53.41
  • 53.41
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
50.80
  • 50.80
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
47.58
  • 47.58
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
44.21
  • 44.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSMODG00000006199.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000006199.

Cross-references

EnsemblENSMODG00000006199 (TIMP4)
HGNCHGNC:11823 (TIMP4)
Uniprot/SPTREMBLF6ZTQ4, F6ZTQ4_MONDO

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