M. domestica Gene: CHD8 - ENSMODG00000006219 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000006219
NameCHD8
Descriptionchromodomain helicase DNA binding protein 8 [Source:HGNC Symbol;Acc:HGNC:20153]
OrganismMonodelphis domestica (opossum)
Synonym(s)duplin, helsnf1, kiaa1564

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.26e3
  • 3.26e3
  • 3.40e3
  • 5.75e3
84.95
  • 84.95
  • 84.33
  • 73.48
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
3.54e3
  • 3.54e3
83.64
  • 83.64
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
3.72e3
  • 3.72e3
  • 5.94e3
82.82
  • 82.82
  • 72.59
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.81e3
  • 3.81e3
82.40
  • 82.40
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.84e3
  • 3.84e3
82.29
  • 82.29
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.92e3
  • 3.92e3
81.90
  • 81.90
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
3.96e3
  • 3.96e3
81.72
  • 81.72
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.08e3
  • 4.08e3
  • 6.12e3
  • 6.66e3
81.17
  • 81.17
  • 71.73
  • 69.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
4.45e3
  • 4.45e3
  • 5.43e3
  • 7.65e3
79.47
  • 79.47
  • 74.93
  • 64.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.09e3
  • 5.09e3
  • 7.63e3
76.52
  • 76.52
  • 64.79
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.71e3
  • 5.71e3
  • 6.12e3
73.67
  • 73.67
  • 71.76
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.72e3
  • 5.72e3
  • 6.70e3
  • 8.10e3
73.59
  • 73.59
  • 69.07
  • 62.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.13e3
  • 6.13e3
  • 6.39e3
71.70
  • 71.70
  • 70.48
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
6.13e3
  • 6.13e3
71.69
  • 71.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.74e3
  • 6.74e3
  • 6.89e3
  • 8.76e3
68.87
  • 68.87
  • 68.19
  • 59.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
6.77e3
  • 6.77e3
68.75
  • 68.75
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
7.02e3
  • 7.02e3
67.60
  • 67.60
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.36e3
  • 7.36e3
66.04
  • 66.04
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.84e3
  • 7.84e3
63.79
  • 63.79
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.62e3
  • 8.62e3
60.20
  • 60.20
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.87e3
  • 9.87e3
54.45
  • 54.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000006219 (CHD8)
HGNCHGNC:20153 (CHD8)
Uniprot/SPTREMBLF7FS88, F7FS88_MONDO

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