M. domestica Gene: ITGBL1 - ENSMODG00000006309 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000006309
NameITGBL1
Descriptionintegrin subunit beta like 1 [Source:HGNC Symbol;Acc:HGNC:6164]
OrganismMonodelphis domestica (opossum)
Synonym(s)oscp, tied
Orthologs(s)19 orthologs
Paralog(s)280 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
2.59e3
  • 2.59e3
88.04
  • 88.04
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
5.53e3
  • 5.53e3
  • 6.71e3
  • 8.61e3
74.49
  • 74.49
  • 69.01
  • 60.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.82e3
  • 5.82e3
73.14
  • 73.14
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
7.40e3
  • 7.40e3
65.82
  • 65.82
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.48e3
  • 7.48e3
  • 8.85e3
65.45
  • 65.45
  • 59.14
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
8.29e3
  • 8.29e3
  • 8.79e3
  • 9.58e3
61.72
  • 61.72
  • 59.42
  • 55.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.46e3
  • 8.46e3
  • 1.07e4
  • 1.14e4
60.95
  • 60.95
  • 50.39
  • 47.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
8.79e3
  • 8.79e3
  • 1.09e4
59.41
  • 59.41
  • 49.54
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.88e3
  • 9.88e3
54.37
  • 54.37
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.14e4
  • 1.22e4
50.84
  • 50.84
  • 47.37
  • 43.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
44.34
  • 44.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
  • 1.36e4
  • 1.43e4
41.95
  • 41.95
  • 37.09
  • 33.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
  • 1.39e4
37.60
  • 37.60
  • 36.01
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.46e4
  • 1.46e4
32.67
  • 32.67
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
32.39
  • 32.39
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
31.63
  • 31.63
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
30.71
  • 30.71
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
27.94
  • 27.94
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
  • 1.80e4
26.36
  • 26.36
  • 16.88
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000006309.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota280 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000006309.

Cross-references

EnsemblENSMODG00000006309 (ITGBL1)
HGNCHGNC:6164 (ITGBL1)
Uniprot/SPTREMBLF7BR31, F7BR31_MONDO

Do not show this banner again