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M. domestica Gene: PALM - ENSMODG00000006358 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000006358
NamePALM
Descriptionparalemmin [Source:HGNC Symbol;Acc:HGNC:8594]
OrganismMonodelphis domestica (opossum)
Synonym(s)kiaa0270
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.20e3
  • 2.20e3
  • 5.48e3
  • 7.08e3
89.83
  • 89.83
  • 74.72
  • 67.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.57e3
  • 2.57e3
  • 2.60e3
88.14
  • 88.14
  • 88.01
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.90e3
  • 2.90e3
86.62
  • 86.62
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
3.43e3
  • 3.43e3
  • 5.15e3
  • 5.42e3
84.16
  • 84.16
  • 76.22
  • 74.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
3.94e3
  • 3.94e3
  • 7.37e3
81.80
  • 81.80
  • 65.98
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.43e3
  • 4.43e3
79.53
  • 79.53
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
5.04e3
  • 5.04e3
76.76
  • 76.76
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.66e3
  • 5.66e3
73.88
  • 73.88
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.75e3
  • 5.75e3
  • 5.81e3
  • 6.59e3
73.46
  • 73.46
  • 73.16
  • 69.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.92e3
  • 5.92e3
72.68
  • 72.68
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.18e3
  • 6.18e3
71.46
  • 71.46
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.29e3
  • 7.29e3
  • 8.11e3
66.36
  • 66.36
  • 62.55
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
7.87e3
  • 7.87e3
63.68
  • 63.68
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.78e3
  • 8.78e3
59.48
  • 59.48
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.96e3
  • 8.96e3
  • 9.81e3
58.63
  • 58.63
  • 54.70
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.98e3
  • 8.98e3
  • 1.11e4
  • 1.13e4
58.53
  • 58.53
  • 48.71
  • 47.89
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
43.46
  • 43.46
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
  • 1.30e4
  • 1.31e4
42.40
  • 42.40
  • 39.77
  • 39.58
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
38.64
  • 38.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria10 species10 genesCompare expression
Amniota11 species12 genesCompare expression
Tetrapoda12 species13 genesCompare expression
Euteleostomi13 species14 genesCompare expression

Orthology information comes from OMA : ENSMODG00000006358.

Cross-references

EnsemblENSMODG00000006358 (PALM)
HGNCHGNC:8594 (PALM)
Uniprot/SPTREMBLF6ZR04, F6ZR04_MONDO

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