M. domestica Gene: SSU72 - ENSMODG00000006616 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000006616
NameSSU72
DescriptionSSU72 homolog, RNA polymerase II CTD phosphatase [Source:HGNC Symbol;Acc:HGNC:25016]
OrganismMonodelphis domestica (opossum)
Synonym(s)hspc182
Orthologs(s)26 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.25e3
  • 1.25e3
  • 1.66e3
  • 2.15e3
94.23
  • 94.23
  • 92.35
  • 90.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.65e3
  • 1.65e3
  • 2.96e3
92.38
  • 92.38
  • 86.33
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.78e3
  • 1.78e3
  • 2.62e3
  • 3.54e3
91.77
  • 91.77
  • 87.93
  • 83.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.82e3
  • 1.82e3
91.62
  • 91.62
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.94e3
  • 1.94e3
91.05
  • 91.05
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.02e3
  • 2.02e3
90.70
  • 90.70
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
2.37e3
  • 2.37e3
89.05
  • 89.05
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.45e3
  • 2.45e3
  • 2.82e3
  • 3.48e3
88.70
  • 88.70
  • 86.99
  • 83.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.50e3
  • 2.50e3
  • 3.14e3
  • 3.86e3
88.46
  • 88.46
  • 85.52
  • 82.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.63e3
  • 2.63e3
87.85
  • 87.85
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.64e3
  • 2.64e3
87.83
  • 87.83
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.67e3
  • 2.67e3
87.68
  • 87.68
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.67e3
  • 2.67e3
  • 2.83e3
  • 2.92e3
87.66
  • 87.66
  • 86.93
  • 86.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.72e3
  • 2.72e3
87.46
  • 87.46
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
2.72e3
  • 2.72e3
87.43
  • 87.43
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.01e3
  • 3.01e3
  • 3.49e3
86.09
  • 86.09
  • 83.90
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.27e3
  • 3.27e3
84.92
  • 84.92
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.65e3
  • 3.65e3
  • 4.67e3
83.15
  • 83.15
  • 78.46
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.77e3
  • 3.77e3
82.60
  • 82.60
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.78e3
  • 3.78e3
82.57
  • 82.57
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
4.28e3
  • 4.28e3
  • 5.62e3
80.26
  • 80.26
  • 74.08
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
4.59e3
  • 4.59e3
78.79
  • 78.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species14 genesCompare expression
Mammalia14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSMODG00000006616.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000006616.

Cross-references

EnsemblENSMODG00000006616 (SSU72)
HGNCHGNC:25016 (SSU72)
Uniprot/SPTREMBLF7GEV0, F7GEV0_MONDO

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