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M. domestica Gene: GDAP1 - ENSMODG00000006937 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000006937
NameGDAP1
Descriptionganglioside induced differentiation associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15968]
OrganismMonodelphis domestica (opossum)
Synonym(s)cmt2k, cmt4, cmt4a
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
1.95e3
  • 1.95e3
  • 2.43e3
  • 6.76e3
91.01
  • 91.01
  • 88.76
  • 68.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
2.20e3
  • 2.20e3
  • 3.30e3
89.83
  • 89.83
  • 84.76
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.54e3
  • 3.54e3
83.64
  • 83.64
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
44.98
  • 44.98
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.23e4
  • 1.23e4
43.36
  • 43.36
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
40.93
  • 40.93
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
33.64
  • 33.64
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
33.56
  • 33.56
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
32.39
  • 32.39
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.59e4
  • 1.59e4
26.64
  • 26.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSMODG00000006937.

Cross-references

EnsemblENSMODG00000006937 (GDAP1)
HGNCHGNC:15968 (GDAP1)
Uniprot/SPTREMBLF6RGH2, F6RGH2_MONDO

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