M. domestica Gene: OGFOD3 - ENSMODG00000007092 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000007092
NameOGFOD3
Description2-oxoglutarate and iron-dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
OrganismMonodelphis domestica (opossum)
Synonym(s)c17orf101, flj22222
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.13e3
  • 3.13e3
  • 5.30e3
85.56
  • 85.56
  • 75.55
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.78e3
  • 4.78e3
  • 5.11e3
77.92
  • 77.92
  • 76.39
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.01e3
  • 5.01e3
76.87
  • 76.87
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
5.26e3
  • 5.26e3
75.70
  • 75.70
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.27e3
  • 5.27e3
75.67
  • 75.67
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
5.75e3
  • 5.75e3
73.47
  • 73.47
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
5.87e3
  • 5.87e3
  • 6.58e3
72.91
  • 72.91
  • 69.62
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.93e3
  • 5.93e3
  • 6.80e3
  • 7.14e3
72.63
  • 72.63
  • 68.63
  • 67.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.04e3
  • 6.04e3
  • 6.76e3
  • 7.61e3
72.10
  • 72.10
  • 68.79
  • 64.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.10e3
  • 6.10e3
71.85
  • 71.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.15e3
  • 6.15e3
  • 7.25e3
  • 8.02e3
71.61
  • 71.61
  • 66.54
  • 63.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.38e3
  • 6.38e3
  • 8.56e3
  • 9.20e3
70.56
  • 70.56
  • 60.47
  • 57.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.58e3
  • 6.58e3
69.64
  • 69.64
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.62e3
  • 6.62e3
69.46
  • 69.46
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.89e3
  • 6.89e3
  • 7.81e3
68.18
  • 68.18
  • 63.94
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.59e3
  • 7.59e3
64.94
  • 64.94
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
8.51e3
  • 8.51e3
60.71
  • 60.71
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.82e3
  • 8.82e3
59.30
  • 59.30
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.39e3
  • 9.39e3
56.66
  • 56.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
9.49e3
  • 9.49e3
  • 1.01e4
  • 1.01e4
56.19
  • 56.19
  • 53.41
  • 53.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.96e3
  • 9.96e3
54.00
  • 54.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000007092.

Cross-references

EnsemblENSMODG00000007092 (OGFOD3)
HGNCHGNC:26174 (OGFOD3)
Uniprot/SPTREMBLF6QSM5, F6QSM5_MONDO

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