We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

M. domestica Gene: SBSPON - ENSMODG00000007144 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000007144
NameSBSPON
Descriptionsomatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
OrganismMonodelphis domestica (opossum)
Synonym(s)c8orf84, rpesp
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
3.62e3
  • 3.62e3
83.28
  • 83.28
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
3.80e3
  • 3.80e3
82.44
  • 82.44
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
4.78e3
  • 4.78e3
77.92
  • 77.92
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
4.80e3
  • 4.80e3
  • 7.68e3
77.84
  • 77.84
  • 64.54
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.43e3
  • 6.43e3
  • 6.65e3
70.33
  • 70.33
  • 69.32
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
7.23e3
  • 7.23e3
66.62
  • 66.62
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
8.10e3
  • 8.10e3
62.59
  • 62.59
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
8.58e3
  • 8.58e3
60.39
  • 60.39
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
8.80e3
  • 8.80e3
  • 9.55e3
  • 1.22e4
59.36
  • 59.36
  • 55.92
  • 43.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.97e3
  • 8.97e3
58.59
  • 58.59
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.36e3
  • 9.36e3
  • 9.45e3
56.77
  • 56.77
  • 56.36
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
  • 1.30e4
  • 1.43e4
51.50
  • 51.50
  • 40.17
  • 33.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
49.93
  • 49.93
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
45.28
  • 45.28
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.22e4
  • 1.38e4
45.27
  • 45.27
  • 43.73
  • 36.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
44.95
  • 44.95
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
1.24e4
  • 1.24e4
  • 1.26e4
42.76
  • 42.76
  • 41.72
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
41.92
  • 41.92
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
  • 1.38e4
  • 1.40e4
40.28
  • 40.28
  • 36.51
  • 35.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.39e4
  • 1.39e4
35.91
  • 35.91
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.42e4
  • 1.42e4
34.42
  • 34.42
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.46e4
  • 1.46e4
32.44
  • 32.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000007144.

Cross-references

EnsemblENSMODG00000007144 (SBSPON)
HGNCHGNC:30362 (SBSPON)
Uniprot/SPTREMBLF6RYM8, F6RYM8_MONDO

Do not show this banner again