We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

M. domestica Gene: C3orf20 - ENSMODG00000007181 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000007181
NameC3orf20
Descriptionchromosome 3 open reading frame 20 [Source:HGNC Symbol;Acc:HGNC:25320]
OrganismMonodelphis domestica (opossum)
Synonym(s)dkfzp434n1817
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.25e3
  • 1.25e3
94.22
  • 94.22
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.35e3
  • 1.35e3
93.78
  • 93.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.57e3
  • 1.57e3
  • 2.08e3
  • 2.33e3
92.78
  • 92.78
  • 90.42
  • 89.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.84e3
  • 2.84e3
  • 7.92e3
  • 7.94e3
86.88
  • 86.88
  • 63.43
  • 63.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.40e3
  • 4.40e3
  • 6.88e3
  • 8.14e3
79.69
  • 79.69
  • 68.25
  • 62.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
5.36e3
  • 5.36e3
75.26
  • 75.26
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.57e3
  • 5.57e3
74.29
  • 74.29
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.82e3
  • 5.82e3
73.15
  • 73.15
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
5.83e3
  • 5.83e3
73.07
  • 73.07
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.88e3
  • 5.88e3
72.87
  • 72.87
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.93e3
  • 5.93e3
72.62
  • 72.62
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.95e3
  • 5.95e3
  • 6.53e3
72.52
  • 72.52
  • 69.85
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.64e3
  • 6.64e3
  • 7.21e3
69.36
  • 69.36
  • 66.73
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
6.90e3
  • 6.90e3
  • 7.73e3
68.17
  • 68.17
  • 64.33
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.22e3
  • 7.22e3
  • 8.30e3
  • 9.62e3
66.67
  • 66.67
  • 61.67
  • 55.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.30e3
  • 7.30e3
66.32
  • 66.32
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.99e3
  • 7.99e3
  • 8.62e3
  • 9.14e3
63.12
  • 63.12
  • 60.23
  • 57.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
8.57e3
  • 8.57e3
60.45
  • 60.45
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.64e3
  • 8.64e3
60.11
  • 60.11
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.03e3
  • 9.03e3
  • 1.01e4
58.30
  • 58.30
  • 53.54
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.53e3
  • 9.53e3
56.02
  • 56.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000007181.

Cross-references

EnsemblENSMODG00000007181 (C3orf20)
HGNCHGNC:25320 (C3orf20)
Uniprot/SPTREMBLF6RJ79, F6RJ79_MONDO, F6XAN7, F6XAN7_MONDO

Do not show this banner again