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M. domestica Gene: MSC - ENSMODG00000007225 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000007225
NameMSC
Descriptionmusculin [Source:HGNC Symbol;Acc:HGNC:7321]
OrganismMonodelphis domestica (opossum)
Synonym(s)abf-1, bhlha22
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.03e4
  • 1.03e4
52.60
  • 52.60
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.74e4
  • 1.90e4
51.34
  • 51.34
  • 19.72
  • 12.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
45.10
  • 45.10
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
41.31
  • 41.31
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
40.04
  • 40.04
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.30e4
  • 1.30e4
40.00
  • 40.00
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.33e4
  • 1.33e4
38.59
  • 38.59
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
36.65
  • 36.65
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.48e4
  • 1.48e4
  • 1.58e4
31.90
  • 31.90
  • 27.03
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
31.52
  • 31.52
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
  • 1.58e4
  • 1.77e4
30.12
  • 30.12
  • 27.26
  • 18.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
24.15
  • 24.15
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
17.85
  • 17.85
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
16.34
  • 16.34
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Amniota15 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000007225.

Cross-references

EnsemblENSMODG00000007225 (MSC)
HGNCHGNC:7321 (MSC)
Uniprot/SPTREMBLF6WCT4, F6WCT4_MONDO

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