M. domestica Gene: PRPF39 - ENSMODG00000007393 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000007393
NamePRPF39
Descriptionpre-mRNA processing factor 39 [Source:HGNC Symbol;Acc:HGNC:20314]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj11128, flj20666

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.55e3
  • 2.55e3
  • 3.41e3
88.22
  • 88.22
  • 84.24
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.85e3
  • 2.85e3
86.85
  • 86.85
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.03e3
  • 3.03e3
86.00
  • 86.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.69e3
  • 3.69e3
  • 4.57e3
  • 7.53e3
82.98
  • 82.98
  • 78.93
  • 65.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
4.02e3
  • 4.02e3
81.47
  • 81.47
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
4.16e3
  • 4.16e3
80.79
  • 80.79
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.67e3
  • 4.67e3
78.45
  • 78.45
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
4.70e3
  • 4.70e3
  • 5.14e3
78.30
  • 78.30
  • 76.26
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
4.71e3
  • 4.71e3
  • 5.71e3
  • 6.54e3
78.24
  • 78.24
  • 73.62
  • 69.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
5.30e3
  • 5.30e3
  • 6.89e3
75.53
  • 75.53
  • 68.18
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
5.78e3
  • 5.78e3
73.30
  • 73.30
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.85e3
  • 5.85e3
72.99
  • 72.99
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.93e3
  • 5.93e3
72.64
  • 72.64
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.14e3
  • 6.14e3
  • 6.72e3
  • 8.21e3
71.67
  • 71.67
  • 68.98
  • 62.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
6.20e3
  • 6.20e3
71.38
  • 71.38
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.29e3
  • 6.29e3
  • 8.11e3
  • 1.01e4
70.98
  • 70.98
  • 62.58
  • 53.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.57e3
  • 6.57e3
69.69
  • 69.69
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
8.52e3
  • 8.52e3
60.69
  • 60.69
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.71e3
  • 8.71e3
  • 9.98e3
59.78
  • 59.78
  • 53.95
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.98e3
  • 8.98e3
  • 9.53e3
  • 1.09e4
58.54
  • 58.54
  • 56.01
  • 49.63
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
52.30
  • 52.30
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
50.27
  • 50.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000007393 (PRPF39)
HGNCHGNC:20314 (PRPF39)
Uniprot/SPTREMBLF6YZN8, F6YZN8_MONDO

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