M. domestica Gene: SLCO5A1 - ENSMODG00000007415 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000007415
NameSLCO5A1
Descriptionsolute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]
OrganismMonodelphis domestica (opossum)
Synonym(s)oatp-j, oatp5a1, oatprp4, slc21a15
Orthologs(s)16 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.23e3
  • 1.23e3
94.35
  • 94.35
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.55e3
  • 1.55e3
92.84
  • 92.84
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.66e3
  • 1.66e3
  • 1.85e3
  • 2.62e3
92.36
  • 92.36
  • 91.45
  • 87.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.52e3
  • 8.52e3
  • 1.02e4
  • 1.08e4
60.67
  • 60.67
  • 53.06
  • 50.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
9.66e3
  • 9.66e3
55.40
  • 55.40
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
53.01
  • 53.01
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
  • 1.48e4
  • 1.69e4
49.22
  • 49.22
  • 31.73
  • 21.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
48.58
  • 48.58
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
42.57
  • 42.57
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.39e4
42.54
  • 42.54
  • 35.70
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.25e4
  • 1.25e4
  • 1.50e4
42.42
  • 42.42
  • 30.95
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.42e4
  • 1.42e4
34.33
  • 34.33
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
32.77
  • 32.77
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
1.75e4
  • 1.75e4
19.06
  • 19.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000007415.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000007415.

Cross-references

EnsemblENSMODG00000007415 (SLCO5A1)
HGNCHGNC:19046 (SLCO5A1)
Uniprot/SPTREMBLF7GKH7, F7GKH7_MONDO

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