M. domestica Gene: PNLDC1 - ENSMODG00000007420 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000007420
NamePNLDC1
DescriptionPARN like, ribonuclease domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21185]
OrganismMonodelphis domestica (opossum)
Synonym(s)dj195p10.2, flj40240
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
6.86e3
  • 6.86e3
68.32
  • 68.32
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.06e4
  • 1.15e4
52.58
  • 52.58
  • 51.07
  • 46.75
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
50.80
  • 50.80
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.33e4
  • 1.47e4
45.52
  • 45.52
  • 38.79
  • 32.00
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
40.18
  • 40.18
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.34e4
  • 1.34e4
38.15
  • 38.15
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.35e4
  • 1.35e4
37.88
  • 37.88
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.39e4
  • 1.39e4
  • 1.48e4
35.98
  • 35.98
  • 31.80
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.42e4
  • 1.42e4
34.53
  • 34.53
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.44e4
  • 1.44e4
  • 1.61e4
33.73
  • 33.73
  • 25.78
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
  • 1.60e4
  • 1.68e4
32.32
  • 32.32
  • 25.93
  • 22.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
29.65
  • 29.65
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
27.28
  • 27.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000007420.

Cross-references

EnsemblENSMODG00000007420 (PNLDC1)
HGNCHGNC:21185 (PNLDC1)
Uniprot/SPTREMBLF7EE59, F7EE59_MONDO

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