M. domestica Gene: BEST1 - ENSMODG00000007571 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000007571
NameBEST1
Descriptionbestrophin 1 [Source:HGNC Symbol;Acc:HGNC:12703]
OrganismMonodelphis domestica (opossum)
Synonym(s)best, bmd, rp50, vmd2
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0000104life cycle
7.83e3
  • 7.83e3
63.84
  • 63.84
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
  • 1.39e4
40.35
  • 40.35
  • 35.97
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
38.55
  • 38.55
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
  • 1.54e4
  • 1.59e4
38.22
  • 38.22
  • 28.87
  • 26.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
  • 1.43e4
35.19
  • 35.19
  • 33.99
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
31.89
  • 31.89
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.57e4
  • 1.57e4
27.38
  • 27.38
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.60e4
  • 1.60e4
26.16
  • 26.16
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
  • 1.97e4
24.08
  • 24.08
  • 9.19
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.66e4
  • 1.66e4
23.50
  • 23.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000007571.

Cross-references

EnsemblENSMODG00000007571 (BEST1)
HGNCHGNC:12703 (BEST1)
Uniprot/SPTREMBLF7FPD4, F7FPD4_MONDO

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