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M. domestica Gene: LRTOMT - ENSMODG00000008057 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000008057
NameLRTOMT
Descriptionleucine rich transmembrane and O-methyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:25033]
OrganismMonodelphis domestica (opossum)
Synonym(s)cfap111, comt2, dfnb63, lrrc51
Orthologs(s)13 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
6.32e3
  • 6.32e3
70.83
  • 70.83
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.90e3
  • 6.90e3
  • 9.00e3
  • 1.07e4
68.15
  • 68.15
  • 58.45
  • 50.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.93e3
  • 6.93e3
  • 9.44e3
68.02
  • 68.02
  • 56.44
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
8.58e3
  • 8.58e3
60.41
  • 60.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.67e3
  • 8.67e3
  • 1.01e4
  • 1.06e4
59.97
  • 59.97
  • 53.38
  • 51.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.81e3
  • 8.81e3
  • 9.01e3
59.35
  • 59.35
  • 58.40
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
9.11e3
  • 9.11e3
57.95
  • 57.95
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
9.67e3
  • 9.67e3
  • 1.14e4
  • 1.33e4
55.34
  • 55.34
  • 47.56
  • 38.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.81e3
  • 9.81e3
  • 1.08e4
  • 1.20e4
54.71
  • 54.71
  • 49.91
  • 44.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
  • 1.06e4
53.27
  • 53.27
  • 51.14
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
52.83
  • 52.83
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.03e4
  • 1.03e4
52.63
  • 52.63
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.03e4
  • 1.03e4
52.61
  • 52.61
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
  • 1.12e4
  • 1.14e4
50.69
  • 50.69
  • 48.21
  • 47.19
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
49.58
  • 49.58
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.18e4
  • 1.18e4
45.74
  • 45.74
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
45.11
  • 45.11
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
43.55
  • 43.55
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
39.06
  • 39.06
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
33.81
  • 33.81
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.59e4
  • 1.59e4
  • 1.94e4
26.71
  • 26.71
  • 10.23
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression

Orthology information comes from OMA : ENSMODG00000008057.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000008057.

Cross-references

EnsemblENSMODG00000008057 (LRTOMT)
HGNCHGNC:25033 (LRTOMT)
Uniprot/SPTREMBLF6Z9J3, F6Z9J3_MONDO

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