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M. domestica Gene: CTSF - ENSMODG00000008118 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000008118
NameCTSF
Descriptioncathepsin F [Source:HGNC Symbol;Acc:HGNC:2531]
OrganismMonodelphis domestica (opossum)
Synonym(s)catsf, cln13
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
1.05e3
  • 1.05e3
95.14
  • 95.14
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.57e3
  • 1.57e3
92.74
  • 92.74
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.84e3
  • 1.84e3
91.50
  • 91.50
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.95e3
  • 1.95e3
  • 2.04e3
90.99
  • 90.99
  • 90.58
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
2.64e3
  • 2.64e3
  • 5.33e3
  • 7.83e3
87.84
  • 87.84
  • 75.40
  • 63.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.70e3
  • 2.70e3
  • 3.61e3
  • 3.94e3
87.55
  • 87.55
  • 83.34
  • 81.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
2.82e3
  • 2.82e3
86.99
  • 86.99
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.91e3
  • 2.91e3
  • 3.29e3
  • 3.99e3
86.56
  • 86.56
  • 84.83
  • 81.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
2.97e3
  • 2.97e3
  • 4.00e3
  • 5.37e3
86.30
  • 86.30
  • 81.52
  • 75.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.24e3
  • 3.24e3
  • 3.75e3
85.07
  • 85.07
  • 82.71
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
3.46e3
  • 3.46e3
  • 7.62e3
84.03
  • 84.03
  • 64.82
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
3.84e3
  • 3.84e3
82.28
  • 82.28
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.20e3
  • 5.20e3
76.01
  • 76.01
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.37e3
  • 5.37e3
75.20
  • 75.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
6.09e3
  • 6.09e3
  • 7.67e3
  • 8.30e3
71.91
  • 71.91
  • 64.59
  • 61.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.75e3
  • 7.75e3
  • 8.76e3
64.24
  • 64.24
  • 59.58
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.00e3
  • 8.00e3
63.08
  • 63.08
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
8.53e3
  • 8.53e3
60.60
  • 60.60
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.88e3
  • 8.88e3
59.01
  • 59.01
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.16e3
  • 9.16e3
57.70
  • 57.70
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.51e3
  • 9.51e3
56.11
  • 56.11
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.61e3
  • 9.61e3
55.62
  • 55.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000008118.

Cross-references

EnsemblENSMODG00000008118 (CTSF)
HGNCHGNC:2531 (CTSF)
Uniprot/SPTREMBLF7FV49, F7FV49_MONDO

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