M. domestica Gene: ZNF397 - ENSMODG00000008247 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000008247
NameZNF397
Descriptionzinc finger protein 397 [Source:HGNC Symbol;Acc:HGNC:18818]
OrganismMonodelphis domestica (opossum)
Synonym(s)mgc13250, znf47, zscan15
Orthologs(s)1 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
7.60e3
  • 7.60e3
  • 7.62e3
64.93
  • 64.93
  • 64.81
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.22e3
  • 8.22e3
  • 9.73e3
62.04
  • 62.04
  • 55.09
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.71e3
  • 8.71e3
  • 9.12e3
  • 9.93e3
59.77
  • 59.77
  • 57.92
  • 54.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.74e3
  • 8.74e3
59.64
  • 59.64
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.24e3
  • 9.24e3
  • 1.04e4
57.34
  • 57.34
  • 52.19
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.59e3
  • 9.59e3
55.71
  • 55.71
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
9.65e3
  • 9.65e3
55.44
  • 55.44
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.79e3
  • 9.79e3
54.82
  • 54.82
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.05e4
  • 1.13e4
53.17
  • 53.17
  • 51.75
  • 47.91
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
53.03
  • 53.03
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
52.95
  • 52.95
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
52.30
  • 52.30
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
  • 1.14e4
  • 1.24e4
51.27
  • 51.27
  • 47.31
  • 42.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
  • 1.13e4
  • 1.16e4
50.45
  • 50.45
  • 47.71
  • 46.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
49.18
  • 49.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
  • 1.23e4
  • 1.52e4
48.78
  • 48.78
  • 43.10
  • 29.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
48.73
  • 48.73
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.14e4
  • 1.14e4
  • 1.23e4
47.47
  • 47.47
  • 43.01
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
46.52
  • 46.52
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
43.08
  • 43.08
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
41.74
  • 41.74
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.43e4
  • 1.43e4
33.92
  • 33.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda1 species1 geneCompare expression

Orthology information comes from OMA : ENSMODG00000008247.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000008247.

Cross-references

EnsemblENSMODG00000008247 (ZNF397)
HGNCHGNC:18818 (ZNF397)
Uniprot/SPTREMBLF7FBB7, F7FBB7_MONDO

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