M. domestica Gene: FOXJ1 - ENSMODG00000008306 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000008306
NameFOXJ1
Descriptionforkhead box J1 [Source:HGNC Symbol;Acc:HGNC:3816]
OrganismMonodelphis domestica (opossum)
Synonym(s)fkhl13, hfh-4, hfh4
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
669
  • 669
  • 2.54e3
96.91
  • 96.91
  • 88.27
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
721
  • 721
  • 867
  • 1.40e3
96.68
  • 96.68
  • 96.00
  • 93.54
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.58e3
  • 1.58e3
92.69
  • 92.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.77e3
  • 1.77e3
  • 2.59e3
  • 2.94e3
91.83
  • 91.83
  • 88.06
  • 86.44
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.03e3
  • 2.03e3
90.63
  • 90.63
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.12e3
  • 2.12e3
90.21
  • 90.21
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
4.11e3
  • 4.11e3
  • 5.25e3
81.03
  • 81.03
  • 75.78
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.55e3
  • 5.55e3
  • 8.04e3
74.40
  • 74.40
  • 62.87
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.87e3
  • 5.87e3
72.92
  • 72.92
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
6.12e3
  • 6.12e3
  • 8.14e3
71.76
  • 71.76
  • 62.43
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
7.83e3
  • 7.83e3
  • 8.31e3
  • 1.07e4
63.84
  • 63.84
  • 61.65
  • 50.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
8.74e3
  • 8.74e3
59.65
  • 59.65
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
9.15e3
  • 9.15e3
57.74
  • 57.74
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
44.93
  • 44.93
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
  • 1.42e4
44.59
  • 44.59
  • 34.38
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
36.34
  • 36.34
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.48e4
  • 1.48e4
31.55
  • 31.55
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
  • 1.56e4
30.64
  • 30.64
  • 28.06
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.58e4
  • 1.58e4
27.05
  • 27.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000008306.

Cross-references

EnsemblENSMODG00000008306 (FOXJ1)
HGNCHGNC:3816 (FOXJ1)
Uniprot/SPTREMBLF7FGZ0, F7FGZ0_MONDO

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