M. domestica Gene: CNBP - ENSMODG00000008362 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000008362
NameCNBP
DescriptionCCHC-type zinc finger, nucleic acid binding protein [Source:HGNC Symbol;Acc:HGNC:13164]
OrganismMonodelphis domestica (opossum)
Synonym(s)cnbp1, dm2, rnf163, zcchc22, znf9
Orthologs(s)19 orthologs
Paralog(s)280 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
137
  • 137
  • 236
  • 354
99.37
  • 99.37
  • 98.92
  • 98.37
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
257
  • 257
98.82
  • 98.82
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
304
  • 304
  • 305
98.60
  • 98.60
  • 98.60
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
314
  • 314
98.56
  • 98.56
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
323
  • 323
98.51
  • 98.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
330
  • 330
  • 391
  • 430
98.48
  • 98.48
  • 98.20
  • 98.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
339
  • 339
98.44
  • 98.44
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
355
  • 355
  • 492
  • 500
98.37
  • 98.37
  • 97.73
  • 97.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
358
  • 358
  • 512
98.35
  • 98.35
  • 97.64
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
368
  • 368
  • 970
  • 1.02e3
98.31
  • 98.31
  • 95.53
  • 95.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
377
  • 377
98.27
  • 98.27
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
454
  • 454
  • 518
  • 608
97.91
  • 97.91
  • 97.61
  • 97.20
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
484
  • 484
97.77
  • 97.77
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
492
  • 492
97.73
  • 97.73
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
499
  • 499
  • 540
97.70
  • 97.70
  • 97.51
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
623
  • 623
97.13
  • 97.13
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
682
  • 682
96.86
  • 96.86
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
684
  • 684
96.85
  • 96.85
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
785
  • 785
96.38
  • 96.38
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
872
  • 872
95.98
  • 95.98
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
873
  • 873
  • 1.22e3
95.97
  • 95.97
  • 94.38
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species17 genesCompare expression
Bilateria18 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000008362.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression
Eukaryota280 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000008362.

Cross-references

EnsemblENSMODG00000008362 (CNBP)
HGNCHGNC:13164 (CNBP)
Uniprot/SPTREMBLF7EJM5, F7EJM5_MONDO

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