M. domestica Gene: PLXNB3 - ENSMODG00000008407 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000008407
NamePLXNB3
Descriptionplexin B3 [Source:HGNC Symbol;Acc:HGNC:9105]
OrganismMonodelphis domestica (opossum)
Synonym(s)plexb3, plexr, plxn6
Orthologs(s)16 orthologs
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
2.58e3
  • 2.58e3
  • 9.11e3
88.09
  • 88.09
  • 57.96
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
6.49e3
  • 6.49e3
70.04
  • 70.04
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
7.33e3
  • 7.33e3
  • 7.50e3
66.18
  • 66.18
  • 65.38
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.99e3
  • 7.99e3
63.10
  • 63.10
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
8.00e3
  • 8.00e3
  • 9.72e3
  • 1.28e4
63.05
  • 63.05
  • 55.15
  • 40.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.53e3
  • 8.53e3
  • 9.34e3
  • 1.16e4
60.64
  • 60.64
  • 56.86
  • 46.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.73e3
  • 9.73e3
  • 1.05e4
55.09
  • 55.09
  • 51.71
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
  • 1.20e4
  • 1.36e4
52.07
  • 52.07
  • 44.38
  • 37.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
  • 1.08e4
51.26
  • 51.26
  • 50.02
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
49.06
  • 49.06
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
46.06
  • 46.06
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.17e4
  • 1.17e4
45.91
  • 45.91
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
45.17
  • 45.17
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
41.50
  • 41.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
  • 1.44e4
  • 1.51e4
36.98
  • 36.98
  • 33.65
  • 30.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
36.49
  • 36.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
  • 1.47e4
  • 1.60e4
35.80
  • 35.80
  • 31.96
  • 26.29
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
33.40
  • 33.40
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
28.26
  • 28.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000008407.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata7 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000008407.

Cross-references

EnsemblENSMODG00000008407 (PLXNB3)
HGNCHGNC:9105 (PLXNB3)
Uniprot/SPTREMBLF6PJL2, F6PJL2_MONDO

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