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M. domestica Gene: SPATC1L - ENSMODG00000008502 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000008502
NameSPATC1L
Descriptionspermatogenesis and centriole associated 1-like [Source:HGNC Symbol;Acc:HGNC:1298]
OrganismMonodelphis domestica (opossum)
Synonym(s)c21orf56
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
331
  • 331
  • 394
  • 465
98.48
  • 98.48
  • 98.19
  • 97.86
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
583
  • 583
97.31
  • 97.31
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
613
  • 613
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
51.67
  • 51.67
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
  • 1.35e4
  • 1.58e4
41.05
  • 41.05
  • 37.80
  • 27.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
35.93
  • 35.93
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
31.29
  • 31.29
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
30.15
  • 30.15
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.52e4
  • 1.52e4
29.98
  • 29.98
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
28.22
  • 28.22
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
  • 1.64e4
  • 1.72e4
26.87
  • 26.87
  • 24.08
  • 20.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.59e4
  • 1.59e4
26.68
  • 26.68
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
23.33
  • 23.33
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.69e4
  • 1.69e4
  • 1.73e4
21.79
  • 21.79
  • 19.95
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
1.82e4
  • 1.82e4
16.16
  • 16.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSMODG00000008502 (SPATC1L)
HGNCHGNC:1298 (SPATC1L)
Uniprot/SPTREMBLF7FTG4, F7FTG4_MONDO

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