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M. domestica Gene: RHBDD3 - ENSMODG00000008618 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000008618
NameRHBDD3
Descriptionrhomboid domain containing 3 [Source:HGNC Symbol;Acc:HGNC:1308]
OrganismMonodelphis domestica (opossum)
Synonym(s)c22orf3, ptag
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.76e3
  • 2.76e3
87.26
  • 87.26
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.64e3
  • 3.64e3
  • 4.59e3
  • 5.29e3
83.21
  • 83.21
  • 78.81
  • 75.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
3.78e3
  • 3.78e3
  • 5.00e3
82.58
  • 82.58
  • 76.90
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
3.81e3
  • 3.81e3
82.40
  • 82.40
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
4.06e3
  • 4.06e3
  • 7.56e3
  • 8.43e3
81.27
  • 81.27
  • 65.11
  • 61.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
4.35e3
  • 4.35e3
79.91
  • 79.91
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.51e3
  • 5.51e3
  • 6.55e3
  • 7.21e3
74.55
  • 74.55
  • 69.79
  • 66.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
5.69e3
  • 5.69e3
73.71
  • 73.71
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
5.72e3
  • 5.72e3
73.58
  • 73.58
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
5.82e3
  • 5.82e3
73.14
  • 73.14
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.89e3
  • 5.89e3
72.79
  • 72.79
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.38e3
  • 6.38e3
70.55
  • 70.55
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.56e3
  • 6.56e3
69.73
  • 69.73
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.75e3
  • 6.75e3
  • 7.43e3
68.86
  • 68.86
  • 65.69
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
6.82e3
  • 6.82e3
  • 7.79e3
68.52
  • 68.52
  • 64.05
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
7.30e3
  • 7.30e3
  • 1.06e4
  • 1.13e4
66.29
  • 66.29
  • 51.24
  • 47.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
7.40e3
  • 7.40e3
  • 9.84e3
  • 1.20e4
65.83
  • 65.83
  • 54.56
  • 44.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.51e3
  • 8.51e3
60.71
  • 60.71
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.60e3
  • 8.60e3
60.28
  • 60.28
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
51.84
  • 51.84
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.05e4
  • 1.05e4
  • 1.09e4
51.69
  • 51.69
  • 49.47
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
49.78
  • 49.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000008618.

Cross-references

EnsemblENSMODG00000008618 (RHBDD3)
HGNCHGNC:1308 (RHBDD3)
Uniprot/SPTREMBLF6PH35, F6PH35_MONDO, F6V8M3, F6V8M3_MONDO

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