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M. domestica Gene: SLC38A6 - ENSMODG00000008682 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000008682
NameSLC38A6
Descriptionsolute carrier family 38 member 6 [Source:HGNC Symbol;Acc:HGNC:19863]
OrganismMonodelphis domestica (opossum)
Synonym(s)nat-1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
9.71e3
  • 9.71e3
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.04e4
  • 1.04e4
52.22
  • 52.22
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.06e4
  • 1.06e4
51.11
  • 51.11
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.08e4
  • 1.08e4
49.91
  • 49.91
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
49.18
  • 49.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
  • 1.24e4
  • 1.37e4
46.73
  • 46.73
  • 42.91
  • 36.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
44.20
  • 44.20
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.26e4
  • 1.26e4
  • 1.31e4
41.76
  • 41.76
  • 39.66
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
  • 1.53e4
  • 1.58e4
41.49
  • 41.49
  • 29.59
  • 27.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
41.13
  • 41.13
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
40.73
  • 40.73
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
38.71
  • 38.71
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
  • 1.39e4
37.98
  • 37.98
  • 35.68
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
  • 1.55e4
  • 1.66e4
32.33
  • 32.33
  • 28.33
  • 23.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
31.40
  • 31.40
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
30.83
  • 30.83
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
  • 1.52e4
30.49
  • 30.49
  • 29.62
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.53e4
  • 1.53e4
  • 1.56e4
29.57
  • 29.57
  • 27.80
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
28.85
  • 28.85
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
26.62
  • 26.62
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
  • 1.62e4
  • 1.69e4
25.47
  • 25.47
  • 25.02
  • 22.07
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000008682 (SLC38A6)
HGNCHGNC:19863 (SLC38A6)
Uniprot/SPTREMBLF6ZFR7, F6ZFR7_MONDO

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