M. domestica Gene: PPHLN1 - ENSMODG00000008885 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000008885
NamePPHLN1
Descriptionperiphilin 1 [Source:HGNC Symbol;Acc:HGNC:19369]
OrganismMonodelphis domestica (opossum)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.35e3
  • 2.35e3
  • 2.88e3
89.17
  • 89.17
  • 86.72
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
2.91e3
  • 2.91e3
  • 4.50e3
86.59
  • 86.59
  • 79.22
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.16e3
  • 3.16e3
  • 4.51e3
  • 5.08e3
85.40
  • 85.40
  • 79.21
  • 76.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
3.19e3
  • 3.19e3
85.27
  • 85.27
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
3.49e3
  • 3.49e3
  • 6.64e3
83.90
  • 83.90
  • 69.34
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.66e3
  • 3.66e3
  • 4.35e3
  • 7.39e3
83.13
  • 83.13
  • 79.94
  • 65.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.81e3
  • 3.81e3
  • 6.69e3
  • 6.83e3
82.43
  • 82.43
  • 69.11
  • 68.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
4.19e3
  • 4.19e3
80.68
  • 80.68
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
4.47e3
  • 4.47e3
79.38
  • 79.38
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.57e3
  • 4.57e3
78.92
  • 78.92
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.70e3
  • 4.70e3
78.31
  • 78.31
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.13e3
  • 5.13e3
  • 5.48e3
  • 6.50e3
76.32
  • 76.32
  • 74.70
  • 70.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.31e3
  • 5.31e3
75.49
  • 75.49
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.11e3
  • 6.11e3
71.78
  • 71.78
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.27e3
  • 6.27e3
  • 7.43e3
  • 8.02e3
71.05
  • 71.05
  • 65.69
  • 62.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
6.30e3
  • 6.30e3
70.92
  • 70.92
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
6.36e3
  • 6.36e3
70.66
  • 70.66
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.67e3
  • 6.67e3
69.23
  • 69.23
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.77e3
  • 6.77e3
68.73
  • 68.73
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.78e3
  • 6.78e3
  • 7.16e3
68.68
  • 68.68
  • 66.93
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.02e4
  • 1.02e4
52.98
  • 52.98
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
39.72
  • 39.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000008885.

Cross-references

EnsemblENSMODG00000008885 (PPHLN1)
HGNCHGNC:19369 (PPHLN1)
Uniprot/SPTREMBLF7BS25, F7BS25_MONDO

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