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M. domestica Gene: - ENSMODG00000009307 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000009307
Name-
Description-
OrganismMonodelphis domestica (opossum)
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
281
  • 281
98.71
  • 98.71
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
364
  • 364
  • 388
  • 402
98.32
  • 98.32
  • 98.21
  • 98.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.88e3
  • 1.88e3
91.31
  • 91.31
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.12e3
  • 2.12e3
  • 2.13e3
  • 8.53e3
90.22
  • 90.22
  • 90.15
  • 60.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
2.92e3
  • 2.92e3
  • 4.22e3
86.53
  • 86.53
  • 80.50
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.18e3
  • 3.18e3
  • 5.11e3
85.32
  • 85.32
  • 76.40
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.83e3
  • 3.83e3
  • 3.98e3
82.30
  • 82.30
  • 81.65
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
4.25e3
  • 4.25e3
80.39
  • 80.39
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.51e3
  • 5.51e3
74.56
  • 74.56
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.15e3
  • 6.15e3
71.60
  • 71.60
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.44e3
  • 8.44e3
  • 8.64e3
61.06
  • 61.06
  • 60.11
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
9.12e3
  • 9.12e3
57.92
  • 57.92
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
9.12e3
  • 9.12e3
57.91
  • 57.91
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
9.47e3
  • 9.47e3
56.30
  • 56.30
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.67e3
  • 9.67e3
55.34
  • 55.34
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
  • 1.03e4
  • 1.03e4
53.61
  • 53.61
  • 52.55
  • 52.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.04e4
  • 1.04e4
51.88
  • 51.88
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
51.10
  • 51.10
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
  • 1.19e4
  • 1.36e4
49.40
  • 49.40
  • 44.96
  • 37.14
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
36.29
  • 36.29
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
  • 1.41e4
  • 1.42e4
35.93
  • 35.93
  • 34.97
  • 34.23
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
35.72
  • 35.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSMODG00000009307.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000009307.

Cross-references

EnsemblENSMODG00000009307
Uniprot/SPTREMBLF6YWX7, F6YWX7_MONDO

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