M. domestica Gene: ARPC5 - ENSMODG00000009325 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000009325
NameARPC5
Descriptionactin related protein 2/3 complex subunit 5 [Source:HGNC Symbol;Acc:HGNC:708]
OrganismMonodelphis domestica (opossum)
Synonym(s)arc16, dj127c7.3, p16-arc
Orthologs(s)11 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.21e3
  • 7.21e3
  • 1.06e4
66.74
  • 66.74
  • 51.15
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.76e3
  • 9.76e3
  • 1.34e4
  • 1.36e4
54.95
  • 54.95
  • 37.98
  • 37.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
53.15
  • 53.15
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
49.57
  • 49.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.38e4
  • 1.52e4
48.49
  • 48.49
  • 36.07
  • 29.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
46.72
  • 46.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
  • 1.33e4
  • 1.87e4
46.26
  • 46.26
  • 38.78
  • 13.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.22e4
  • 1.22e4
43.67
  • 43.67
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
  • 1.46e4
  • 1.60e4
42.04
  • 42.04
  • 32.37
  • 26.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
41.70
  • 41.70
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
38.43
  • 38.43
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
  • 1.71e4
37.12
  • 37.12
  • 21.09
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.41e4
  • 1.41e4
  • 1.62e4
  • 1.78e4
34.80
  • 34.80
  • 25.32
  • 17.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.58e4
  • 1.58e4
  • 1.84e4
27.20
  • 27.20
  • 15.05
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.64e4
  • 1.64e4
24.13
  • 24.13
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.84e4
  • 1.84e4
15.00
  • 15.00
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.85e4
  • 1.85e4
14.42
  • 14.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000009325.

Cross-references

EnsemblENSMODG00000009325 (ARPC5)
HGNCHGNC:708 (ARPC5)
Uniprot/SPTREMBLF7GJN1, F7GJN1_MONDO

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