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M. domestica Gene: VAX1 - ENSMODG00000009428 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000009428
NameVAX1
Descriptionventral anterior homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12660]
OrganismMonodelphis domestica (opossum)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
  • 1.30e4
43.09
  • 43.09
  • 40.01
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 1.65e4
  • 1.79e4
39.16
  • 39.16
  • 23.98
  • 17.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.34e4
  • 1.34e4
38.36
  • 38.36
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
37.07
  • 37.07
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.60e4
  • 1.60e4
26.36
  • 26.36
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
  • 2.08e4
25.54
  • 25.54
  • 4.20
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.65e4
  • 1.65e4
23.71
  • 23.71
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.69e4
  • 1.69e4
21.90
  • 21.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000009428 (VAX1)
HGNCHGNC:12660 (VAX1)
Uniprot/SPTREMBLF7BKU2, F7BKU2_MONDO

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