M. domestica Gene: COPA - ENSMODG00000009549 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000009549
NameCOPA
Descriptioncoatomer protein complex subunit alpha [Source:HGNC Symbol;Acc:HGNC:2230]
OrganismMonodelphis domestica (opossum)
Synonym(s)hep-cop
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.34e3
  • 1.34e3
93.82
  • 93.82
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.34e3
  • 1.34e3
  • 2.42e3
  • 2.97e3
93.80
  • 93.80
  • 88.82
  • 86.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.43e3
  • 1.43e3
  • 2.07e3
  • 2.34e3
93.41
  • 93.41
  • 90.47
  • 89.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.57e3
  • 1.57e3
  • 1.96e3
  • 2.12e3
92.78
  • 92.78
  • 90.96
  • 90.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.68e3
  • 1.68e3
  • 2.30e3
92.25
  • 92.25
  • 89.40
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.69e3
  • 1.69e3
92.22
  • 92.22
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.69e3
  • 1.69e3
  • 1.82e3
92.19
  • 92.19
  • 91.61
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.74e3
  • 1.74e3
  • 2.66e3
91.98
  • 91.98
  • 87.71
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.90e3
  • 1.90e3
91.23
  • 91.23
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.12e3
  • 2.12e3
90.22
  • 90.22
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.19e3
  • 2.19e3
  • 2.55e3
89.89
  • 89.89
  • 88.23
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.19e3
  • 2.19e3
89.87
  • 89.87
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
2.23e3
  • 2.23e3
89.70
  • 89.70
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
2.26e3
  • 2.26e3
89.59
  • 89.59
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
2.29e3
  • 2.29e3
  • 2.50e3
  • 2.65e3
89.44
  • 89.44
  • 88.44
  • 87.76
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.33e3
  • 2.33e3
89.26
  • 89.26
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.91e3
  • 2.91e3
86.57
  • 86.57
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.99e3
  • 2.99e3
  • 3.31e3
  • 3.37e3
86.22
  • 86.22
  • 84.73
  • 84.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.27e3
  • 3.27e3
84.90
  • 84.90
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.69e3
  • 3.69e3
82.97
  • 82.97
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.79e3
  • 3.79e3
82.50
  • 82.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSMODG00000009549.

Cross-references

EnsemblENSMODG00000009549 (COPA)
HGNCHGNC:2230 (COPA)
Uniprot/SPTREMBLF7BJZ7, F7BJZ7_MONDO

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