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M. domestica Gene: CBX6 - ENSMODG00000009575 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000009575
NameCBX6
Descriptionchromobox 6 [Source:HGNC Symbol;Acc:HGNC:1556]
OrganismMonodelphis domestica (opossum)
Orthologs(s)7 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.98e3
  • 3.98e3
81.65
  • 81.65
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.28e3
  • 5.28e3
  • 6.39e3
  • 7.12e3
75.63
  • 75.63
  • 70.50
  • 67.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
6.00e3
  • 6.00e3
  • 6.25e3
  • 8.23e3
72.29
  • 72.29
  • 71.16
  • 61.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.68e3
  • 6.68e3
  • 7.15e3
  • 8.16e3
69.18
  • 69.18
  • 67.01
  • 62.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
6.88e3
  • 6.88e3
  • 1.02e4
68.26
  • 68.26
  • 52.70
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.29e3
  • 7.29e3
  • 7.91e3
66.37
  • 66.37
  • 63.49
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.13e3
  • 8.13e3
62.45
  • 62.45
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.21e3
  • 8.21e3
62.12
  • 62.12
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.52e3
  • 8.52e3
  • 8.66e3
60.68
  • 60.68
  • 60.02
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
8.78e3
  • 8.78e3
  • 9.62e3
59.48
  • 59.48
  • 55.58
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
9.14e3
  • 9.14e3
57.79
  • 57.79
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.89e3
  • 9.89e3
54.35
  • 54.35
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.95e3
  • 9.95e3
54.07
  • 54.07
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
50.87
  • 50.87
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
  • 1.24e4
  • 1.26e4
50.55
  • 50.55
  • 42.63
  • 42.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
48.85
  • 48.85
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.20e4
  • 1.21e4
47.86
  • 47.86
  • 44.65
  • 44.17
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
47.52
  • 47.52
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
41.70
  • 41.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSMODG00000009575 (CBX6)
HGNCHGNC:1556 (CBX6)
Uniprot/SPTREMBLF7AX29, F7AX29_MONDO

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