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M. domestica Gene: PCMTD1 - ENSMODG00000009645 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000009645
NamePCMTD1
Descriptionprotein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30483]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj10883
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.19e3
  • 1.19e3
  • 3.47e3
94.52
  • 94.52
  • 83.96
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.01e3
  • 2.01e3
  • 5.00e3
  • 5.70e3
90.72
  • 90.72
  • 76.94
  • 73.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.60e3
  • 2.60e3
  • 3.61e3
88.00
  • 88.00
  • 83.35
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.25e3
  • 3.25e3
  • 4.56e3
  • 5.83e3
85.02
  • 85.02
  • 78.97
  • 73.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
3.33e3
  • 3.33e3
84.65
  • 84.65
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.35e3
  • 4.35e3
79.91
  • 79.91
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
4.37e3
  • 4.37e3
79.82
  • 79.82
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.16e3
  • 5.16e3
76.17
  • 76.17
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.21e3
  • 5.21e3
  • 6.97e3
  • 9.62e3
75.93
  • 75.93
  • 67.82
  • 55.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.40e3
  • 5.40e3
  • 6.60e3
  • 6.84e3
75.06
  • 75.06
  • 69.51
  • 68.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.44e3
  • 5.44e3
  • 7.50e3
74.87
  • 74.87
  • 65.38
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.49e3
  • 5.49e3
74.65
  • 74.65
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.22e3
  • 6.22e3
71.27
  • 71.27
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.24e3
  • 7.24e3
66.60
  • 66.60
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
7.65e3
  • 7.65e3
  • 8.38e3
  • 9.86e3
64.68
  • 64.68
  • 61.32
  • 54.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
8.13e3
  • 8.13e3
62.48
  • 62.48
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.42e3
  • 8.42e3
61.11
  • 61.11
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.63e3
  • 8.63e3
60.15
  • 60.15
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
9.11e3
  • 9.11e3
57.94
  • 57.94
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
53.14
  • 53.14
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.04e4
  • 1.04e4
  • 1.05e4
52.16
  • 52.16
  • 51.49
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
49.84
  • 49.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species15 genesCompare expression
Mammalia15 species16 genesCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSMODG00000009645.

Cross-references

EnsemblENSMODG00000009645 (PCMTD1)
HGNCHGNC:30483 (PCMTD1)
Uniprot/SPTREMBLF6QTB4, F6QTB4_MONDO, F7BX53, F7BX53_MONDO

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