M. domestica Gene: DCLRE1A - ENSMODG00000009872 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000009872
NameDCLRE1A
DescriptionDNA cross-link repair 1A [Source:HGNC Symbol;Acc:HGNC:17660]
OrganismMonodelphis domestica (opossum)
Synonym(s)hsnm1, kiaa0086, pso2, snm1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.32e3
  • 8.32e3
61.58
  • 61.58
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.62e3
  • 8.62e3
60.23
  • 60.23
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
8.63e3
  • 8.63e3
60.16
  • 60.16
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
8.70e3
  • 8.70e3
59.82
  • 59.82
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.91e3
  • 8.91e3
  • 1.04e4
  • 1.15e4
58.87
  • 58.87
  • 52.19
  • 47.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.17e3
  • 9.17e3
  • 1.08e4
  • 1.09e4
57.65
  • 57.65
  • 49.92
  • 49.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
9.31e3
  • 9.31e3
57.03
  • 57.03
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
9.55e3
  • 9.55e3
  • 1.04e4
55.94
  • 55.94
  • 51.84
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.58e3
  • 9.58e3
  • 1.19e4
  • 1.24e4
55.79
  • 55.79
  • 45.09
  • 42.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.79e3
  • 9.79e3
  • 1.07e4
  • 1.17e4
54.82
  • 54.82
  • 50.80
  • 46.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.86e3
  • 9.86e3
  • 1.01e4
54.49
  • 54.49
  • 53.55
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
9.94e3
  • 9.94e3
  • 1.16e4
54.09
  • 54.09
  • 46.64
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
49.09
  • 49.09
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
48.44
  • 48.44
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
47.13
  • 47.13
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
  • 1.18e4
  • 1.39e4
46.15
  • 46.15
  • 45.36
  • 35.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.17e4
  • 1.17e4
45.98
  • 45.98
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
45.43
  • 45.43
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
44.07
  • 44.07
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
  • 1.35e4
42.33
  • 42.33
  • 37.68
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
41.74
  • 41.74
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
37.75
  • 37.75
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000009872 (DCLRE1A)
HGNCHGNC:17660 (DCLRE1A)
Uniprot/SPTREMBLF6VUL3, F6VUL3_MONDO

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