M. domestica Gene: RNMTL1 - ENSMODG00000010029 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000010029
NameRNMTL1
DescriptionRNA methyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:18485]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj10581, hc90, mrm3, rmtl1
Orthologs(s)25 orthologs
Paralog(s)280 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.20e3
  • 5.20e3
76.00
  • 76.00
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.60e3
  • 5.60e3
74.16
  • 74.16
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.00e3
  • 6.00e3
72.30
  • 72.30
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.47e3
  • 6.47e3
70.11
  • 70.11
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
6.84e3
  • 6.84e3
  • 7.66e3
68.41
  • 68.41
  • 64.64
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.98e3
  • 6.98e3
  • 8.53e3
  • 1.13e4
67.78
  • 67.78
  • 60.61
  • 47.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.32e3
  • 7.32e3
  • 7.90e3
  • 7.92e3
66.22
  • 66.22
  • 63.51
  • 63.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.07e3
  • 8.07e3
  • 8.50e3
  • 8.91e3
62.77
  • 62.77
  • 60.75
  • 58.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.64e3
  • 8.64e3
60.10
  • 60.10
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.91e3
  • 8.91e3
  • 1.01e4
58.85
  • 58.85
  • 53.54
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
9.20e3
  • 9.20e3
57.52
  • 57.52
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
9.46e3
  • 9.46e3
  • 1.13e4
  • 1.15e4
56.35
  • 56.35
  • 47.96
  • 46.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.76e3
  • 9.76e3
54.94
  • 54.94
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.82e3
  • 9.82e3
54.68
  • 54.68
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.11e4
53.59
  • 53.59
  • 48.96
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.13e4
  • 1.13e4
  • 1.25e4
47.73
  • 47.73
  • 42.14
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
45.55
  • 45.55
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.19e4
  • 1.19e4
45.02
  • 45.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.27e4
  • 1.28e4
44.89
  • 44.89
  • 41.18
  • 40.72
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
40.96
  • 40.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSMODG00000010029.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota280 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000010029.

Cross-references

EnsemblENSMODG00000010029 (RNMTL1)
HGNCHGNC:18485 (RNMTL1)
Uniprot/SPTREMBLF6TUK5, F6TUK5_MONDO

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