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M. domestica Gene: CLTCL1 - ENSMODG00000010107 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000010107
NameCLTCL1
Descriptionclathrin, heavy chain-like 1 [Source:HGNC Symbol;Acc:HGNC:2093]
OrganismMonodelphis domestica (opossum)
Synonym(s)chc22, clh22, cltcl, cltd
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
94.24
  • 94.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.67e3
  • 1.67e3
  • 2.27e3
  • 2.63e3
92.29
  • 92.29
  • 89.51
  • 87.88
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
2.08e3
  • 2.08e3
90.40
  • 90.40
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
2.83e3
  • 2.83e3
  • 7.00e3
86.93
  • 86.93
  • 67.68
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
3.21e3
  • 3.21e3
85.19
  • 85.19
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.59e3
  • 3.59e3
  • 4.88e3
  • 5.15e3
83.44
  • 83.44
  • 77.49
  • 76.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.99e3
  • 4.99e3
76.94
  • 76.94
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.25e3
  • 5.25e3
  • 8.27e3
  • 8.81e3
75.74
  • 75.74
  • 61.83
  • 59.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.45e3
  • 5.45e3
74.83
  • 74.83
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.98e3
  • 5.98e3
  • 6.38e3
  • 7.12e3
72.38
  • 72.38
  • 70.54
  • 67.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
6.18e3
  • 6.18e3
71.49
  • 71.49
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.17e3
  • 8.17e3
62.28
  • 62.28
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
8.53e3
  • 8.53e3
  • 9.58e3
  • 1.04e4
60.62
  • 60.62
  • 55.77
  • 51.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.66e3
  • 8.66e3
  • 1.10e4
60.02
  • 60.02
  • 49.38
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.15e4
  • 1.15e4
46.74
  • 46.74
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
  • 1.21e4
46.66
  • 46.66
  • 43.97
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
45.46
  • 45.46
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
44.63
  • 44.63
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
43.07
  • 43.07
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
  • 1.38e4
40.23
  • 40.23
  • 36.17
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria9 species9 genesCompare expression
Amniota11 species11 genesCompare expression
Tetrapoda12 species12 genesCompare expression
Bilateria18 species18 genesCompare expression

Orthology information comes from OMA : ENSMODG00000010107.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000010107.

Cross-references

EnsemblENSMODG00000010107 (CLTCL1)
HGNCHGNC:2093 (CLTCL1)
Uniprot/SPTREMBLF6X4I0, F6X4I0_MONDO

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