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M. domestica Gene: LONRF3 - ENSMODG00000010165 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000010165
NameLONRF3
DescriptionLON peptidase N-terminal domain and ring finger 3 [Source:HGNC Symbol;Acc:HGNC:21152]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj22612, rnf127
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
2.27e3
  • 2.27e3
  • 2.79e3
  • 1.19e4
89.53
  • 89.53
  • 87.12
  • 44.86
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.60e3
  • 2.60e3
87.98
  • 87.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.17e3
  • 3.17e3
  • 4.09e3
  • 5.23e3
85.36
  • 85.36
  • 81.14
  • 75.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
3.36e3
  • 3.36e3
  • 3.98e3
84.47
  • 84.47
  • 81.64
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.46e3
  • 3.46e3
84.05
  • 84.05
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
4.42e3
  • 4.42e3
79.60
  • 79.60
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
49.30
  • 49.30
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.30e4
  • 1.37e4
48.15
  • 48.15
  • 39.94
  • 36.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.17e4
  • 1.17e4
45.93
  • 45.93
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
41.73
  • 41.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.32e4
40.34
  • 40.34
  • 39.11
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
37.93
  • 37.93
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
36.89
  • 36.89
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
  • 1.57e4
36.61
  • 36.61
  • 27.61
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.50e4
  • 1.50e4
30.89
  • 30.89
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
29.41
  • 29.41
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
  • 1.59e4
26.65
  • 26.65
  • 26.52
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000010165.

Cross-references

EnsemblENSMODG00000010165 (LONRF3)
HGNCHGNC:21152 (LONRF3)
Uniprot/SPTREMBLF6TAJ9, F6TAJ9_MONDO

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