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M. domestica Gene: ABCB1 - ENSMODG00000010227 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000010227
NameABCB1
DescriptionUncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F7CHK3]
OrganismMonodelphis domestica (opossum)
Synonym(s)abc20, cd243, clcs, gp170, mdr1, p-gp, pgy1
Orthologs(s)24 orthologs
Paralog(s)19 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.58e3
  • 2.58e3
88.09
  • 88.09
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
3.02e3
  • 3.02e3
86.06
  • 86.06
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.06e3
  • 3.06e3
  • 3.18e3
  • 4.28e3
85.87
  • 85.87
  • 85.31
  • 80.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
3.26e3
  • 3.26e3
84.93
  • 84.93
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.35e3
  • 3.35e3
  • 3.37e3
84.54
  • 84.54
  • 84.47
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.84e3
  • 3.84e3
  • 9.37e3
82.29
  • 82.29
  • 56.74
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.87e3
  • 3.87e3
  • 4.46e3
  • 4.97e3
82.15
  • 82.15
  • 79.41
  • 77.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.52e3
  • 4.52e3
  • 5.50e3
  • 5.68e3
79.12
  • 79.12
  • 74.60
  • 73.78
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.32e3
  • 5.32e3
75.43
  • 75.43
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.40e3
  • 5.40e3
  • 6.60e3
75.06
  • 75.06
  • 69.51
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
6.76e3
  • 6.76e3
  • 7.60e3
  • 1.15e4
68.78
  • 68.78
  • 64.90
  • 47.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
7.22e3
  • 7.22e3
  • 1.06e4
66.69
  • 66.69
  • 50.95
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
7.46e3
  • 7.46e3
65.54
  • 65.54
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
7.58e3
  • 7.58e3
65.03
  • 65.03
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
7.74e3
  • 7.74e3
  • 8.50e3
  • 9.92e3
64.29
  • 64.29
  • 60.77
  • 54.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
8.12e3
  • 8.12e3
62.53
  • 62.53
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.16e3
  • 8.16e3
62.32
  • 62.32
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
48.82
  • 48.82
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.18e4
  • 1.18e4
45.43
  • 45.43
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.48e4
  • 1.48e4
31.67
  • 31.67
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.52e4
  • 1.52e4
29.70
  • 29.70
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.54e4
  • 1.54e4
28.79
  • 28.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species14 genesCompare expression
Tetrapoda13 species15 genesCompare expression
Euteleostomi14 species16 genesCompare expression
Bilateria21 species24 genesCompare expression

Orthology information comes from OMA : ENSMODG00000010227.

Paralogs (same species)

Cross-references

EnsemblENSMODG00000010227 (ABCB1)
HGNCHGNC:40 (ABCB1)
Uniprot/SPTREMBLF7CHK3, F7CHK3_MONDO

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