M. domestica Gene: PRPF8 - ENSMODG00000010480 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000010480
NamePRPF8
Descriptionpre-mRNA processing factor 8 [Source:HGNC Symbol;Acc:HGNC:17340]
OrganismMonodelphis domestica (opossum)
Synonym(s)hprp8, prp8, prpc8, rp13, snrnp220
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.19e3
  • 1.19e3
94.52
  • 94.52
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.24e3
  • 1.24e3
  • 2.05e3
94.30
  • 94.30
  • 90.55
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.42e3
  • 1.42e3
  • 1.97e3
93.46
  • 93.46
  • 90.93
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.42e3
  • 1.42e3
  • 2.75e3
  • 3.35e3
93.44
  • 93.44
  • 87.31
  • 84.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.45e3
  • 1.45e3
93.32
  • 93.32
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.54e3
  • 1.54e3
92.92
  • 92.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.60e3
  • 1.60e3
  • 1.88e3
  • 3.37e3
92.60
  • 92.60
  • 91.31
  • 84.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.69e3
  • 1.69e3
  • 2.69e3
  • 2.93e3
92.20
  • 92.20
  • 87.57
  • 86.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.79e3
  • 1.79e3
  • 2.62e3
  • 3.41e3
91.76
  • 91.76
  • 87.90
  • 84.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.88e3
  • 1.88e3
  • 2.40e3
  • 3.88e3
91.31
  • 91.31
  • 88.93
  • 82.10
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.77e3
  • 2.77e3
87.23
  • 87.23
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
2.80e3
  • 2.80e3
  • 4.78e3
87.07
  • 87.07
  • 77.92
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
3.07e3
  • 3.07e3
85.83
  • 85.83
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.09e3
  • 3.09e3
85.75
  • 85.75
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.59e3
  • 3.59e3
83.44
  • 83.44
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
4.03e3
  • 4.03e3
81.38
  • 81.38
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
4.06e3
  • 4.06e3
81.24
  • 81.24
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.09e3
  • 4.09e3
  • 4.54e3
81.13
  • 81.13
  • 79.06
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
4.19e3
  • 4.19e3
80.65
  • 80.65
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
8.15e3
  • 8.15e3
62.36
  • 62.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSMODG00000010480.

Cross-references

EnsemblENSMODG00000010480 (PRPF8)
HGNCHGNC:17340 (PRPF8)
Uniprot/SPTREMBLF7ESJ6, F7ESJ6_MONDO

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