M. domestica Gene: SRR - ENSMODG00000010639 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000010639
NameSRR
Descriptionserine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
OrganismMonodelphis domestica (opossum)
Synonym(s)ilv1, iso1
Orthologs(s)17 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
3.47e3
  • 3.47e3
  • 4.74e3
  • 5.47e3
84.00
  • 84.00
  • 78.11
  • 74.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
3.53e3
  • 3.53e3
83.72
  • 83.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.13e3
  • 4.13e3
  • 5.52e3
  • 5.97e3
80.94
  • 80.94
  • 74.50
  • 72.42
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
4.30e3
  • 4.30e3
80.13
  • 80.13
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.34e3
  • 4.34e3
  • 4.49e3
  • 5.07e3
79.97
  • 79.97
  • 79.29
  • 76.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
4.68e3
  • 4.68e3
78.41
  • 78.41
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.71e3
  • 4.71e3
78.28
  • 78.28
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.12e3
  • 5.12e3
76.37
  • 76.37
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.23e3
  • 5.23e3
75.85
  • 75.85
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.44e3
  • 5.44e3
74.89
  • 74.89
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
5.66e3
  • 5.66e3
73.86
  • 73.86
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.72e3
  • 5.72e3
  • 6.32e3
73.58
  • 73.58
  • 70.85
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.78e3
  • 5.78e3
73.34
  • 73.34
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
5.81e3
  • 5.81e3
73.19
  • 73.19
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
6.84e3
  • 6.84e3
  • 6.85e3
  • 1.02e4
68.44
  • 68.44
  • 68.36
  • 52.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
7.05e3
  • 7.05e3
  • 8.08e3
  • 1.00e4
67.44
  • 67.44
  • 62.72
  • 53.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.34e3
  • 7.34e3
  • 8.40e3
66.13
  • 66.13
  • 61.20
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
7.45e3
  • 7.45e3
65.61
  • 65.61
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
7.64e3
  • 7.64e3
  • 9.95e3
64.74
  • 64.74
  • 54.07
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.48e3
  • 8.48e3
60.86
  • 60.86
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
8.52e3
  • 8.52e3
  • 8.88e3
60.65
  • 60.65
  • 58.99
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000010639.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000010639.

Cross-references

EnsemblENSMODG00000010639 (SRR)
HGNCHGNC:14398 (SRR)
Uniprot/SPTREMBLF7D4W8, F7D4W8_MONDO

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